Browse of TCMCG010C16880 protein

CDS

Accession Number	TCMCG010C16880
gbkey	CDS
Protein Id	XP_016570251.1
Location	complement(join(191600127..191600234,191600356..191600439,191600522..191600752,191600840..191600995,191601095..191601191,191602400..191602576,191602693..191603078,191603941..191604039,191604381..191604564,191604642..191604787,191606601..191606658,191607822..191608449,191609252..191609402,191609608..191609682,191609782..191609935,191611815..191611915,191612009..191612092,191612480..191612625,191612705..191612873,191614573..191614674,191614769..191614843,191614961..191615041,191615350..191615456,191616843..191616908,191617005..191617150,191621651..191621785,191622625..191622761,191631177..191631251,191631328..191631513,191632052..191632174,191632557..191632670,191633802..191633894,191637627..191637698,191637794..191637916,191638155..191638273,191649181..191649274,191656320..191656496,191658157..191658210))
Gene	LOC107868160
GeneID	107868160
Organism	Capsicum annuum

Protein

Length	1770aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA319678
db_source	XM_016714765.1
Definition	PREDICTED: rRNA biogenesis protein RRP5 isoform X2 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Suppressor of forked protein (Suf)
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTATCAGAAAAACTACAGTTTTTGGAGTTCATGCAGATTTGCAAAAAATCAGTCGGAAATGGACACCAATTTTCTATCTAGTGTATATCACGTCGGGCAGCTGGTTTCTTGCATCGTCTTGCACTTGGATGACGATAAGAAAGAAGCAGGGAAGAGAAAGATTTGGCTTTCCTTACATCTCTCCTTATTGCACAAGAGCTTAACTCTTGACGTTATTCAAGAGGGAATGATTCTTAGTGCCTACGTGAAAAGCATGGAAGACCATGGTTATATAATTCATTTCGGGCTGCCTTCCTTCTCAGGATTTATGCCAAAAGAATCAGAAAATGTGGAAGTTAAGATTAGAAGTGGACATCTGGTACAAGGGGTTGTTAAAAGTATTAATAGAATGCATAACGTTGTCTATTTGAGTTCTGATCCTGATGCTGTCTCCAAATGTGTGACCAAGGATCTTAAGGGGCTATCAATTGATCTTCTCGTTCCAGGAATGATGGTTAATGCCAGTGTGCGTTCAATTCTTGATAATGGAATTATGTTATCATTCCTCACGTACTTTACCGGAACAGCTGACATGTTCAATTTGCAGCAATCTTTCCCCTCTTCCAATTGGAAAGTTGATTATCCACAAAATAAAAAGGTTAATGCTCGGATACTATTTATTGATCCATCAACTAGAGCTGTTGGTTTGACATTGAATCCTCATCTGGTTCACAACAAGGCTCCTCCTGCACTTATCAAGGTTGGAGACATTTTTGATCAATCAAAAGTGATCAGGATTGATAGGGGTTTGGGTCTTTTGCTGGAAATCCCTTCTTCTCCAGTTCCAACTCCAACATATGTTAATGTATCTGATGTTGCTGATAAGGAAGTGATAAAGCTGGAGAAAAGTTTCAAGGAGGGGAAACTTGTTCGCGTTAGGGTTCTTGGGTTTAGGCATCTAGAAGGACTTGCTACAGGGGTTTTGAAGACCAGTGCATTTGAAGGGTCAGTTTTCACTCATTCAGATGTTAAACCTGGGATGGTGGTTAAAGGTAAAGTCATTGCAGTAGACAGCTTCGGTGCCATAGTACAATTTTCTAGTGGTGTGAAAGCACTTTGTCCTCTTCGTCACATGTCAGAATTTGAGATCGTAAAACCCAGGAAAAAATTCCAGGTTGGAGCAGAATTAGTTTTTCGTATTCTTGGTTGCAAGTCAAAGAGAATCACTATTACACACAAGAAGACACTAGTTAAATCGAAACTTGAAATTCTTGGTTCTTATGCTGATGCTACTGAAGGACTAACAACACACGGGTGGATAACGAAGATTGAAAACCACGGTTGCTTTGTCCGCTTTTACAATGGAGTACAAGGGTTTGCCCCTAGATCTGAACTTGGACTTGATCCCGGGTGTGAAATAAGTTCCATGTATCACGTTGAACAAGTAGTCAAATGTAGAGTTACAAGTTCTAATCCGGCTTCACGCCGTATTAACCTCAGTTTCACAACGACTCCCTCAAGGGTATTCAGCAATGAACTCGTTAAACCTGGAAATGTTGTTTCTGGAGTGGTTGAACGAGTAACTCCGGATGCAATTGTGGTAGATGTTACTGCTCAGGGTCGTTTTAAGGGCACAATCTCACCCCAACATTTGTCTGATCACAGTGGCCATGCTGAGTTGATGAAGTCTGCCTTGAGACCTGGGTATGAGTTTGATCAGCTTTTGGTTCTTGACATAGACGGCAGCAATTTTATACTCTCTGCAAAACATTCTCTTGTGATCTCAGCTCAGCAACTTCCGCTGGATATTAACCAAGTCCGTCTTAACTCGGTGCTGCATGGATATGTTTGTAATATAATTGAAAGTGGTATCTTCATTCGCTACCTTGGGCGCTTGACTGGGTTTTCTCCAAGAAACAGGGCTACTGATGACAGAAGATCTAGTCTTTCTGAAGTTTACCAGATTGGACAGTCTGTACGCACTAACGTTGTTGATGTCAGCAGTGAAACAAGTCGAATTACAGTTTCTTTGAAGCAGTCTTTTTGCTCTTCAACGGATGCATCCTTTATTCAAGAATACTTCCGTGTGGAGGAGAAGATTGCCAAGCTGCAGTCAGTGGACTCTGGAGGTTCCGACTTAAGATGGGTGGAACAGTTTAATCTGGGTTGCACTGTGAAGGGAAAAGTTCATGAAATAAAGGAATTCGGTGTTGTAGTAAGCTTTCAGAAATGTGATGACGTTTTTGGTTTTATTTCCCACTATCAGTTAAGTGGAATCCCAGTGGAGACTGGCTCAAGTATTCGTACTGCAGTACTTGATATTTCCAAGATAGAACGCCTGGTGGATCTGTCTTTGAAGCCTGTTTTTGTGAATAAATCAAAGAAAGAGACCACTAACAGTCAAACCCAGAAGAAACGCAAAAGGGAAATGCTAGGAGAATTGGAAGTAAATCAAACTGTAAATGCTGTTGTGGAGATTGTTAAAGAAAATTACTTGGTTGTTTCAGTACCATCATATAATTACACTCTTGGATATGCATCACGAGCTGATTACAATACTCAAAATCTTCCACCTAAATCATTTACCAATGGAGAAAGTGTCATTGCCACTGTTATGGCCCTTCCCTCTCCTTCAACAAGTGGGAGATTGCTGCTGCAGCTCAAGTCTATCAGTGAAGCTATTGAAACGTCAAATTCCAAGAGGGCTAAAAGGAAATCTACTTATAATGTTGGATCGCTGGTTCAGGCAGAGATTACTGAAATAAGGCCACTTGAACTGAGACTAAAATTTGGGTCCAGTTTCCATGGGAGGGTGCACATAACAGAGGCATCGGATGACAATTACACTGAAGCTCCATTTAGTAACTTCAGATTTGGGCAGACTCTTACTGCAAGGATCATTTCAAAGTTCAATATGTCAGAAAGTGTTAACAGAGTCTATCAGTGGGAGCTATCCATTAAACCATCCATACTTGCAGGATCTGGTGAAATTGAACCCGTTAAAAAATTCAGTTATTCAACTGGCCAGCTAGTTTCTGGCTTTGTGTACAAAGTTGACAGTGAATGGGCTTGGTTAACGATATCTCGAGATGTTAAGGCCCAGCTCTATATCTTAAATAGCTCAAGTGAGCCTAGTGAGCTAGATGAATTTCAGAAAATGTTCTCTGTTGGCAGGGCCTTCTCTGGTTATGTTTTAAGTTGTAACAAGGAGAAGAAGTTAGTGCGCTTAATTTCACATCCACTGTTGATTGACCCAGAAAGACATGCTTGTCAAGAAGATGGTCCCACAGATCATTTAAGTGAAAATATGTCATTTCATATTCGTAAAGGCAGTGTTTTGGGTGGCAGGATTTCCAAAATCCTTCCAGGTGTTGGTGGAGTGCTTGTTCAGATTGATCCTCACCTATATGGTAAGGTTCATTTCACTGAACTGACAGATCCAGGGGTAACCGATCCTCTATCTGGATATCATGAAGGACAATTTGTAAAGTGCAAAGTTCTGGAGATTGCTTATTCAGGCAAGGGAACTGTTCATATTGACCTCTCGCTGCGATCTATTTCACACAAAACCCAGAAGCAGAAACTCTCTGCACTCAATGACACTTTGAAGTTTCCTGTATTGGTGGAGAAGATTGAGGATCTTCATCCTAATATGATGGTGCAGGCATATGTGAAAAATGTAACACCAAAAGGATGTTTTTTAATGCTTTCGCACAAAGTTGATGCTAAAGTTCTCCTGTCAAACTTGTCTGATGGCTATGTGGAAAATCCAGAGAAAGAATTCCCTGTTGGGAAACTTGTCATGGGAAAGGTGGTCTCCGTGGAGCCATTGTCCAAGCGAGTGGAAGTCACTCTAAGGACATCAAGTTCAGTTGGTGCGCCCAGCTCTGATTATGATGCTCTAAGTAATTTGACTGTTGGGAATGTCATATCTGGCAGAGTCAAGCGAGTTGAACCATATGGTCTGTTTATCACAGTTGATCACACAAACTTGGTTGGGTTGTGCCATATTTCAGAGATCTCTGATAATCATGTTGACACTATTGACTCTAGACACAAAGCTGGGGATAGAGTGACAGCAAAGATTTTGAAGGTTGATAAGGAAAGACATCGAATTTCACTTGGGATGAAGAAATCATATTTTAATGCTGCTACAAGTACTGAAACAGATGCAAGGCCGAGTTCTGGTTATACAGTGAGTGGAGATGCTCTTTCCATAGGTATTGAATCAACTCCTTCACCTGAGAAGAGCTCTCAAGCACGGGAGGATCTTGATGGTGAATCTGTTGATGGGAAGGATCTGTTCCTTGCTGAAGTTGAATCTCGGGCATCCATACCACCACTGGATGTCCCACTTGATGATACTGAAAATTTGGATATGGGTGATGTAGTTAATGAAGACTCAGGTGATGTCATCAATTTGGATACTTTAGATGACAAGAACAAGAAACATGCAGCAAAAAAAGCTAAAAGATTGAGGGAACAAGAAATTAGAGCTGCCGAGGAAAGATTACTGGAAAAAGATATTCCCAGAGATGAAGATGAGTTTGAGAAATTAGTTAGAAGTTCCCCTAATAGCAGCTTTGTCTGGATAAAATACATGGCATTTGTGCTGTCTTTGGCTGATGTTGAGAAGGCCCGATTGATCGCCGAACGGGCCTTGAGGACGATAAATGTGCGAGAAGAGTTGGAAAAGCTGAATGTTTGGGTTGCTTACTTTAATTTAGAAAACGAGTATGGAAATCCACCAGAGGAAGCTGTTGCAAAAGTATTCCAAAGAGCATTGCAGTATTGTGATCCCAAAAAAGTGCATTTGGCCTTGTTAGGAATGTATGAGAGGACTGAGCAACACAAACTCACAGATGAACTTCTTAACAAGATGGTCAAGAAGTTCAAGCATTCGTGCAAGGTTTGGCTCAGGCGTATTCAGTGGCTATTGAAACAAAACCAAGATGGAGTCCAGTCAGTGGTGAATCGTGCTTTGCTAAGTCTTCCTCCGCACAAACATATTAACTTTATTACACAAACAGCTATTCTAGAGTTCAAGTGTGGAGTTCCTGACAGGGGTCGCTCCTTATTTGAGAAAATGCTTCGCGAGTATCCAAAGAGAACTGATCTGTGGAGCGTTTATCTTGATCAGGAGATTCGACTGGGAAATGCAGATGTGATCCGTGCCTTATTTGAAAGGGCAATTACTCTTAGCCTTCCACCCAAAAAGATGAAGTTCCTCTTTAAAAAGTATCTTGAGTATGAAAAGACGCTTGGTGATGATGAACGAATGGAGGCTGTGAAAAGGAAAGCAATGGAATATGTTGAGAGCAGTCTTGCATGA

Protein:   MYQKNYSFWSSCRFAKNQSEMDTNFLSSVYHVGQLVSCIVLHLDDDKKEAGKRKIWLSLHLSLLHKSLTLDVIQEGMILSAYVKSMEDHGYIIHFGLPSFSGFMPKESENVEVKIRSGHLVQGVVKSINRMHNVVYLSSDPDAVSKCVTKDLKGLSIDLLVPGMMVNASVRSILDNGIMLSFLTYFTGTADMFNLQQSFPSSNWKVDYPQNKKVNARILFIDPSTRAVGLTLNPHLVHNKAPPALIKVGDIFDQSKVIRIDRGLGLLLEIPSSPVPTPTYVNVSDVADKEVIKLEKSFKEGKLVRVRVLGFRHLEGLATGVLKTSAFEGSVFTHSDVKPGMVVKGKVIAVDSFGAIVQFSSGVKALCPLRHMSEFEIVKPRKKFQVGAELVFRILGCKSKRITITHKKTLVKSKLEILGSYADATEGLTTHGWITKIENHGCFVRFYNGVQGFAPRSELGLDPGCEISSMYHVEQVVKCRVTSSNPASRRINLSFTTTPSRVFSNELVKPGNVVSGVVERVTPDAIVVDVTAQGRFKGTISPQHLSDHSGHAELMKSALRPGYEFDQLLVLDIDGSNFILSAKHSLVISAQQLPLDINQVRLNSVLHGYVCNIIESGIFIRYLGRLTGFSPRNRATDDRRSSLSEVYQIGQSVRTNVVDVSSETSRITVSLKQSFCSSTDASFIQEYFRVEEKIAKLQSVDSGGSDLRWVEQFNLGCTVKGKVHEIKEFGVVVSFQKCDDVFGFISHYQLSGIPVETGSSIRTAVLDISKIERLVDLSLKPVFVNKSKKETTNSQTQKKRKREMLGELEVNQTVNAVVEIVKENYLVVSVPSYNYTLGYASRADYNTQNLPPKSFTNGESVIATVMALPSPSTSGRLLLQLKSISEAIETSNSKRAKRKSTYNVGSLVQAEITEIRPLELRLKFGSSFHGRVHITEASDDNYTEAPFSNFRFGQTLTARIISKFNMSESVNRVYQWELSIKPSILAGSGEIEPVKKFSYSTGQLVSGFVYKVDSEWAWLTISRDVKAQLYILNSSSEPSELDEFQKMFSVGRAFSGYVLSCNKEKKLVRLISHPLLIDPERHACQEDGPTDHLSENMSFHIRKGSVLGGRISKILPGVGGVLVQIDPHLYGKVHFTELTDPGVTDPLSGYHEGQFVKCKVLEIAYSGKGTVHIDLSLRSISHKTQKQKLSALNDTLKFPVLVEKIEDLHPNMMVQAYVKNVTPKGCFLMLSHKVDAKVLLSNLSDGYVENPEKEFPVGKLVMGKVVSVEPLSKRVEVTLRTSSSVGAPSSDYDALSNLTVGNVISGRVKRVEPYGLFITVDHTNLVGLCHISEISDNHVDTIDSRHKAGDRVTAKILKVDKERHRISLGMKKSYFNAATSTETDARPSSGYTVSGDALSIGIESTPSPEKSSQAREDLDGESVDGKDLFLAEVESRASIPPLDVPLDDTENLDMGDVVNEDSGDVINLDTLDDKNKKHAAKKAKRLREQEIRAAEERLLEKDIPRDEDEFEKLVRSSPNSSFVWIKYMAFVLSLADVEKARLIAERALRTINVREELEKLNVWVAYFNLENEYGNPPEEAVAKVFQRALQYCDPKKVHLALLGMYERTEQHKLTDELLNKMVKKFKHSCKVWLRRIQWLLKQNQDGVQSVVNRALLSLPPHKHINFITQTAILEFKCGVPDRGRSLFEKMLREYPKRTDLWSVYLDQEIRLGNADVIRALFERAITLSLPPKKMKFLFKKYLEYEKTLGDDERMEAVKRKAMEYVESSLA